REFRESH Bioinformatics Group

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Current release

Version 3.0

  • Linux — kmc (main application generating database of k-mers and tools): 64-bit executables
  • Windows — kmc (main application generating database of k-mers and tools): 64-bit executables
  • Mac OS — kmc (main application generating database of k-mers and tools): 64-bit executables

  • KMC API description v. 3.0
  • KMC tools description v. 3.0

  • The source codes are written in C++ and can be compiled with GCC for various operating systems. You can access them at GitHub repository.

Read the readme file for details on installation and license.

The examples showing how KMC tools can be used in existing projects for significant speed up and memory usage reduction are given below. Consult the recent paper (especially supplementary material for details).

Previous release

Version 2.3

Read the readme file for details on installation and license.

Version 2.2

Read the readme file for details on installation and license.

Version 2.1.1

Version 2.1

Version 2.0

Version 1.0

To compile the source codes you will need the following C++ libraries: OpenMP, Boost::thread, Boost::filesystem.

Version 0.3

To compile the source codes you will need the following C++ libraries: OpenMP, Boost::thread, Boost::filesystem.

Licence

KMC is a free software distributed under GNU GPL3 licence for academic, research, and commercial use.